Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 ZBED1P1-201ENST00000502364 1930 ntBASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRAV18A0A075B6X5 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 AL645939.2-201ENST00000427340 991 ntBASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 AC243562.2-201ENST00000561247 970 ntBASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 AC091304.2-201ENST00000564639 760 ntBASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 MIR3652-201ENST00000579335 131 ntBASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 CLEC4GP1-201ENST00000596555 870 ntBASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 PTENP1-202ENST00000532280 3996 ntBASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.57□□□□□ -0.24
TRAV18A0A075B6X5 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRAV18A0A075B6X5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms