Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC236430.1-201ENST00000402231 743 ntBASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 COX20P2-201ENST00000452636 358 ntBASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 MIR4453-201ENST00000584019 89 ntBASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 AC023908.3-201ENST00000564211 3047 ntBASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 MIR346-201ENST00000362234 95 ntBASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 INGX-202ENST00000489074 768 ntBASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 AC067863.1-201ENST00000494933 530 ntBASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 AC008267.7-201ENST00000624570 1194 ntBASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
DDX49Q9Y6V7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 FOXO1B-201ENST00000504678 1527 ntBASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 AC092580.3-201ENST00000430932 139 ntBASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 KRT8P23-201ENST00000560090 1207 ntBASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 CICP13-201ENST00000422015 2789 ntBASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
DDX49Q9Y6V7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.95■□□□□ 0.62
DDX49Q9Y6V7 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms