Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA11Q9Y5H2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 FO393414.2-201ENST00000405153 598 ntBASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 BANF1P1-201ENST00000553684 263 ntBASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 SNHG9-202ENST00000564014 471 ntBASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 AC092127.1-201ENST00000567093 3455 ntBASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 RN7SL828P-201ENST00000607615 303 ntBASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 AC134684.3-201ENST00000641758 218 ntBASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PCDHGA11Q9Y5H2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 KRT18P13-201ENST00000400056 1290 ntBASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 SPDYE17-201ENST00000412399 783 ntBASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 AC004967.1-201ENST00000453589 447 ntBASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 AL512356.2-201ENST00000546955 174 ntBASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
PCDHGA11Q9Y5H2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms