Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 RN7SL618P-201ENST00000477850 296 ntBASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 IGHV3-42-201ENST00000520410 361 ntBASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 RFPL4AP1-201ENST00000530883 850 ntBASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AC025423.2-201ENST00000537570 439 ntBASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AL590560.3-201ENST00000623350 461 ntBASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 METTL15-211ENST00000634762 718 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AL031430.1-201ENST00000642067 1039 ntBASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 AC100757.3-201ENST00000622361 1406 ntBASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB13Q9Y5F0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 AC241585.1-201ENST00000433527 519 ntBASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 AC063950.1-202ENST00000600133 568 ntBASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB13Q9Y5F0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms