Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 FAM45BP-202ENST00000592932 1624 ntBASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHA7Q9UN72 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 CICP11-201ENST00000434745 2827 ntBASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 DNAJB3-201ENST00000446806 729 ntBASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 KRT8P12-202ENST00000472924 1397 ntBASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHA7Q9UN72 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 ZBED1P1-201ENST00000502364 1930 ntBASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA7Q9UN72 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA7Q9UN72 AJ011931.1-201ENST00000618749 2492 ntBASIC17.83■□□□□ 0.45
PCDHA7Q9UN72 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA7Q9UN72 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA7Q9UN72 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA7Q9UN72 MROH4P-201ENST00000431302 1578 ntBASIC17.83■□□□□ 0.45
PCDHA7Q9UN72 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA7Q9UN72 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA7Q9UN72 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA7Q9UN72 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA7Q9UN72 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms