Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 AL158212.4-201ENST00000624062 1286 ntBASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 AC004790.1-201ENST00000612686 536 ntBASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 AL645728.2-202ENST00000641679 227 ntBASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 HYMAI-201ENST00000635591 3347 ntBASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGC3Q9UN70 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGC3Q9UN70 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.52■□□□□ 0.23
PCDHGC3Q9UN70 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGC3Q9UN70 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGC3Q9UN70 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
PCDHGC3Q9UN70 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHGC3Q9UN70 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms