Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDH9Q9ULB4 CU634019.7-201ENST00000624153 1185 ntBASIC16.54■□□□□ 0.24
CDH9Q9ULB4 FP236241.2-201ENST00000624906 1185 ntBASIC16.54■□□□□ 0.24
CDH9Q9ULB4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CDH9Q9ULB4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH9Q9ULB4 AL139384.1-201ENST00000612143 3047 ntBASIC16.54■□□□□ 0.24
CDH9Q9ULB4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH9Q9ULB4 PRAL-201ENST00000624952 3286 ntBASIC16.54■□□□□ 0.24
CDH9Q9ULB4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH9Q9ULB4 AC092127.1-201ENST00000567093 3455 ntBASIC16.54■□□□□ 0.24
CDH9Q9ULB4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDH9Q9ULB4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH9Q9ULB4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH9Q9ULB4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH9Q9ULB4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH9Q9ULB4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 AC022188.1-201ENST00000620960 1664 ntBASIC16.53■□□□□ 0.24
CDH9Q9ULB4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 GAPDHP40-201ENST00000505218 1006 ntBASIC16.53■□□□□ 0.24
CDH9Q9ULB4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.53■□□□□ 0.24
CDH9Q9ULB4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.53■□□□□ 0.24
CDH9Q9ULB4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 CICP13-201ENST00000422015 2789 ntBASIC16.53■□□□□ 0.24
CDH9Q9ULB4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.53■□□□□ 0.24
CDH9Q9ULB4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH9Q9ULB4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 TTTY23B-201ENST00000442790 549 ntBASIC16.52■□□□□ 0.24
CDH9Q9ULB4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 AC010319.3-201ENST00000597028 470 ntBASIC16.52■□□□□ 0.24
CDH9Q9ULB4 AC093813.1-201ENST00000605066 256 ntBASIC16.52■□□□□ 0.24
CDH9Q9ULB4 AC025181.2-201ENST00000606994 802 ntBASIC16.52■□□□□ 0.24
CDH9Q9ULB4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH9Q9ULB4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms