Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
DUX4Q9UBX2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 AP005117.1-202ENST00000581724 1908 ntBASIC13.92□□□□□ -0.18
DUX4Q9UBX2 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 BX842568.4-201ENST00000421222 227 ntBASIC13.92□□□□□ -0.18
DUX4Q9UBX2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 AC004832.2-201ENST00000426397 482 ntBASIC13.92□□□□□ -0.18
DUX4Q9UBX2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.92□□□□□ -0.18
DUX4Q9UBX2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 AP002472.1-201ENST00000577490 586 ntBASIC13.92□□□□□ -0.18
DUX4Q9UBX2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.92□□□□□ -0.18
DUX4Q9UBX2 AC091812.2-201ENST00000619081 385 ntBASIC13.92□□□□□ -0.18
DUX4Q9UBX2 AP001350.2-201ENST00000625104 1094 ntBASIC13.92□□□□□ -0.18
DUX4Q9UBX2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 ME2P1-201ENST00000426028 1970 ntBASIC13.92□□□□□ -0.18
DUX4Q9UBX2 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
DUX4Q9UBX2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 FAM58CP-201ENST00000435741 640 ntBASIC13.91□□□□□ -0.18
DUX4Q9UBX2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 ALOX12P2-203ENST00000570921 1945 ntBASIC13.91□□□□□ -0.18
DUX4Q9UBX2 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
DUX4Q9UBX2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX4Q9UBX2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.9□□□□□ -0.18
DUX4Q9UBX2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.9□□□□□ -0.18
DUX4Q9UBX2 CSPG4P11-201ENST00000560634 4910 ntBASIC13.9□□□□□ -0.18
DUX4Q9UBX2 KRT8P39-201ENST00000396270 1433 ntBASIC13.9□□□□□ -0.18
DUX4Q9UBX2 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX4Q9UBX2 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
DUX4Q9UBX2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms