Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 PRSS29P-201ENST00000440800 595 ntBASIC14.42□□□□□ -0.1
CLN6Q9NWW5 AL513480.1-201ENST00000451731 511 ntBASIC14.42□□□□□ -0.1
CLN6Q9NWW5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 AJ011931.1-201ENST00000618749 2492 ntBASIC14.42□□□□□ -0.1
CLN6Q9NWW5 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.42□□□□□ -0.1
CLN6Q9NWW5 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 AC005912.2-201ENST00000619492 2400 ntBASIC14.42□□□□□ -0.1
CLN6Q9NWW5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 PMS2P7-201ENST00000506558 1336 ntBASIC14.41□□□□□ -0.1
CLN6Q9NWW5 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 RPS2P28-201ENST00000314255 741 ntBASIC14.41□□□□□ -0.1
CLN6Q9NWW5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.41□□□□□ -0.1
CLN6Q9NWW5 AC243562.2-201ENST00000561247 970 ntBASIC14.41□□□□□ -0.1
CLN6Q9NWW5 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 MIR4313-201ENST00000580760 101 ntBASIC14.41□□□□□ -0.1
CLN6Q9NWW5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 IFNL4P1-201ENST00000607083 540 ntBASIC14.41□□□□□ -0.1
CLN6Q9NWW5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 AC087386.2-201ENST00000623212 4637 ntBASIC14.41□□□□□ -0.1
CLN6Q9NWW5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 ZBED1P1-201ENST00000502364 1930 ntBASIC14.41□□□□□ -0.1
CLN6Q9NWW5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLN6Q9NWW5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.4□□□□□ -0.1
CLN6Q9NWW5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLN6Q9NWW5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLN6Q9NWW5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLN6Q9NWW5 AC073439.1-201ENST00000624121 1774 ntBASIC14.4□□□□□ -0.1
CLN6Q9NWW5 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLN6Q9NWW5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLN6Q9NWW5 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms