Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 AC009477.1-201ENST00000452936 217 ntBASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 HNRNPUP1-201ENST00000554987 333 ntBASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SDHAF3Q9NRP4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 AP005117.1-202ENST00000581724 1908 ntBASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 AC044860.1-202ENST00000559481 777 ntBASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 AL096865.1-201ENST00000606796 927 ntBASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 AL109936.8-201ENST00000641772 604 ntBASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SDHAF3Q9NRP4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms