Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 AL391825.1-201ENST00000457671 1364 ntBASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
ATP13A1Q9HD20 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 AL035633.1-201ENST00000406139 838 ntBASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 RARRES2P5-201ENST00000564013 466 ntBASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 AC020658.6-201ENST00000623564 1870 ntBASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 CICP13-201ENST00000422015 2789 ntBASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ATP13A1Q9HD20 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 AC138969.3-201ENST00000546612 1459 ntBASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 AC138932.2-201ENST00000548268 1459 ntBASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 AC126755.4-201ENST00000549796 1459 ntBASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 API5-211ENST00000534695 560 ntTSL 5 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 AC140912.1-201ENST00000577171 1054 ntBASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 AL662799.1-202ENST00000614205 422 ntBASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.06■□□□□ 0.16
ATP13A1Q9HD20 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.05■□□□□ 0.16
ATP13A1Q9HD20 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP13A1Q9HD20 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP13A1Q9HD20 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP13A1Q9HD20 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ATP13A1Q9HD20 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms