Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LRRC40Q9H9A6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 TSEN15P1-201ENST00000423257 515 ntBASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 MIR6069-201ENST00000620069 79 ntBASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
LRRC40Q9H9A6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 CNN2P2-201ENST00000443536 909 ntBASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 CNN2P3-201ENST00000450201 906 ntBASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 AC109322.1-201ENST00000524499 1264 ntBASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 AL136317.3-201ENST00000618497 906 ntBASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.97■□□□□ 0.15
LRRC40Q9H9A6 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms