Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 AP002414.1-201ENST00000391405 1147 ntBASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 POLD2P1-201ENST00000511220 997 ntBASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 AC092865.5-201ENST00000545435 363 ntBASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 LINC00895-201ENST00000629028 1637 ntBASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 PPT1-213ENST00000641319 2388 ntBASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFAF3Q9BU61 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 CICP11-201ENST00000434745 2827 ntBASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFAF3Q9BU61 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 MED15P5-201ENST00000423150 992 ntBASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 IGHV3-22-201ENST00000520721 359 ntBASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 AC145285.3-201ENST00000564603 959 ntBASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 Z83851.2-201ENST00000609564 659 ntBASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFAF3Q9BU61 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms