Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSMD1Q96PZ7 AC007787.1-201ENST00000588095 1583 ntBASIC13.14□□□□□ -0.31
CSMD1Q96PZ7 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.14□□□□□ -0.31
CSMD1Q96PZ7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CSMD1Q96PZ7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.14□□□□□ -0.31
CSMD1Q96PZ7 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.14□□□□□ -0.31
CSMD1Q96PZ7 AC243562.2-201ENST00000561247 970 ntBASIC13.14□□□□□ -0.31
CSMD1Q96PZ7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.14□□□□□ -0.31
CSMD1Q96PZ7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.14□□□□□ -0.31
CSMD1Q96PZ7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CSMD1Q96PZ7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 PPY2P-201ENST00000582808 702 ntBASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 AC073413.1-201ENST00000603927 732 ntBASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 AC136604.1-201ENST00000418535 575 ntBASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 AP005019.2-201ENST00000615104 511 ntBASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 AC105137.3-201ENST00000617588 984 ntBASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.13□□□□□ -0.31
CSMD1Q96PZ7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 AL160314.3-201ENST00000556041 767 ntBASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 AC015910.1-201ENST00000579400 975 ntBASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 AC005622.1-201ENST00000636801 1703 ntBASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 SLED1-202ENST00000512051 380 ntBASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 AL353770.1-201ENST00000614915 403 ntBASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 AC116345.2-201ENST00000512837 523 ntBASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 SAMD11P1-201ENST00000571429 661 ntBASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.12□□□□□ -0.31
CSMD1Q96PZ7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms