Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM54Q969K7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM54Q969K7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM54Q969K7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM54Q969K7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM54Q969K7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM54Q969K7 AC006486.2-201ENST00000624246 2199 ntBASIC13.82□□□□□ -0.2
TMEM54Q969K7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM54Q969K7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM54Q969K7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM54Q969K7 AC138035.3-201ENST00000622706 2791 ntBASIC13.82□□□□□ -0.2
TMEM54Q969K7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM54Q969K7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM54Q969K7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 SPDYE18-201ENST00000510091 1050 ntBASIC13.81□□□□□ -0.2
TMEM54Q969K7 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 AC027796.2-201ENST00000575326 344 ntBASIC13.81□□□□□ -0.2
TMEM54Q969K7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.81□□□□□ -0.2
TMEM54Q969K7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM54Q969K7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
TMEM54Q969K7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 FER1L4-210ENST00000615531 5998 ntBASIC13.8□□□□□ -0.2
TMEM54Q969K7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 AC023157.3-201ENST00000619086 2088 ntBASIC13.8□□□□□ -0.2
TMEM54Q969K7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 AL589987.1-201ENST00000453380 819 ntBASIC13.8□□□□□ -0.2
TMEM54Q969K7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 RNA5SP421-201ENST00000516864 134 ntBASIC13.8□□□□□ -0.2
TMEM54Q969K7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 AC000095.1-201ENST00000603208 874 ntBASIC13.8□□□□□ -0.2
TMEM54Q969K7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
TMEM54Q969K7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM54Q969K7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms