Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LMO3Q8TAP4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LMO3Q8TAP4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 AC104457.1-201ENST00000401024 814 ntBASIC16.76■□□□□ 0.27
LMO3Q8TAP4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 GHSR-202ENST00000427970 912 ntBASIC16.76■□□□□ 0.27
LMO3Q8TAP4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 AL645728.2-202ENST00000641679 227 ntBASIC16.76■□□□□ 0.27
LMO3Q8TAP4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LMO3Q8TAP4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 CYMP-203ENST00000474680 1263 ntBASIC16.75■□□□□ 0.27
LMO3Q8TAP4 MEIS3P1-201ENST00000495167 958 ntBASIC16.75■□□□□ 0.27
LMO3Q8TAP4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 AC135586.1-201ENST00000539323 574 ntBASIC16.75■□□□□ 0.27
LMO3Q8TAP4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LMO3Q8TAP4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms