Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC148Q8NFR7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 AC004840.1-201ENST00000636359 365 ntBASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.13■□□□□ 0.49
CCDC148Q8NFR7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 FAM8A3P-201ENST00000427218 844 ntBASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 TIMM17BP1-201ENST00000545713 516 ntBASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 SPCS2P1-201ENST00000561636 679 ntBASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC148Q8NFR7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 AC092127.1-201ENST00000567093 3455 ntBASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 BCRP1-201ENST00000444246 691 ntBASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 AL096865.1-201ENST00000606796 927 ntBASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC148Q8NFR7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms