Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 SPDYE17-201ENST00000412399 783 ntBASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 TREML5P-201ENST00000421694 576 ntBASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 AC092580.3-201ENST00000430932 139 ntBASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 AC106028.4-201ENST00000614509 607 ntBASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SIMC1Q8NDZ2 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 KRT8P12-202ENST00000472924 1397 ntBASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 FO538757.1-201ENST00000623083 1397 ntBASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 SNX18-202ENST00000343017 3140 ntBASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 PHKG1P2-201ENST00000457537 863 ntBASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 AC015911.4-201ENST00000588022 1070 ntBASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SIMC1Q8NDZ2 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 AC136621.1-201ENST00000624017 2304 ntBASIC14.85□□□□□ -0.03
SIMC1Q8NDZ2 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms