Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 AC005077.2-201ENST00000449786 690 ntBASIC16.95■□□□□ 0.3
HERC6Q8IVU3 AC091804.1-201ENST00000486888 567 ntBASIC16.95■□□□□ 0.3
HERC6Q8IVU3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.95■□□□□ 0.3
HERC6Q8IVU3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 AC016629.1-201ENST00000596579 586 ntBASIC16.95■□□□□ 0.3
HERC6Q8IVU3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.95■□□□□ 0.3
HERC6Q8IVU3 AC015967.2-201ENST00000624092 234 ntBASIC16.95■□□□□ 0.3
HERC6Q8IVU3 AC006435.4-201ENST00000625037 234 ntBASIC16.95■□□□□ 0.3
HERC6Q8IVU3 AL356737.1-201ENST00000634391 234 ntBASIC16.95■□□□□ 0.3
HERC6Q8IVU3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HERC6Q8IVU3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.94■□□□□ 0.3
HERC6Q8IVU3 MIR663B-201ENST00000408361 115 ntBASIC16.94■□□□□ 0.3
HERC6Q8IVU3 FNTAP2-201ENST00000430308 634 ntBASIC16.94■□□□□ 0.3
HERC6Q8IVU3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 MTX1P1-201ENST00000440904 838 ntBASIC16.94■□□□□ 0.3
HERC6Q8IVU3 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 AC104982.3-201ENST00000581995 514 ntBASIC16.94■□□□□ 0.3
HERC6Q8IVU3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 AL450472.2-201ENST00000603663 1156 ntBASIC16.94■□□□□ 0.3
HERC6Q8IVU3 AC107373.2-201ENST00000607735 490 ntBASIC16.94■□□□□ 0.3
HERC6Q8IVU3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.94■□□□□ 0.3
HERC6Q8IVU3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERC6Q8IVU3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms