Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 AC092902.6-201ENST00000641783 218 ntBASIC14.07□□□□□ -0.16
LRRC28Q86X40 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRC28Q86X40 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRC28Q86X40 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.06□□□□□ -0.16
LRRC28Q86X40 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRC28Q86X40 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.06□□□□□ -0.16
LRRC28Q86X40 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 FGD5P1-202ENST00000614866 2498 ntBASIC14.05□□□□□ -0.16
LRRC28Q86X40 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.05□□□□□ -0.16
LRRC28Q86X40 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LRRC28Q86X40 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms