Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 AL161645.1-201ENST00000622716 1255 ntBASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 AC025580.3-201ENST00000617932 1424 ntBASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 AL136982.4-201ENST00000437689 1740 ntBASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRRTM1Q86UE6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.69□□□□□ -0.22
LRRTM1Q86UE6 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 PHKG1P2-201ENST00000457537 863 ntBASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 AC097359.3-201ENST00000603982 1210 ntBASIC13.68□□□□□ -0.22
LRRTM1Q86UE6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms