Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 SIGLEC16-201ENST00000599858 1437 ntBASIC13.14□□□□□ -0.31
ZNF546Q86UE3 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.14□□□□□ -0.31
ZNF546Q86UE3 FAM8A3P-201ENST00000427218 844 ntBASIC13.14□□□□□ -0.31
ZNF546Q86UE3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 AL136038.3-201ENST00000561909 1096 ntBASIC13.14□□□□□ -0.31
ZNF546Q86UE3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.14□□□□□ -0.31
ZNF546Q86UE3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ZNF546Q86UE3 PMS2P1-201ENST00000431037 1228 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms