Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 HTR5BP-201ENST00000430851 1154 ntBASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 RNA5SP410-201ENST00000516285 106 ntBASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 AC055717.3-201ENST00000622967 595 ntBASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HDDC2Q7Z4H3 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 AC112504.1-201ENST00000623415 1841 ntBASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 AL359183.1-201ENST00000623796 2132 ntBASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 AC142381.1-201ENST00000426099 345 ntBASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 TIMM8BP1-201ENST00000452384 211 ntBASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HDDC2Q7Z4H3 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HDDC2Q7Z4H3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HDDC2Q7Z4H3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms