Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCXQ7RTU7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC10.52□□□□□ -0.73
SCXQ7RTU7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 MIR346-201ENST00000362234 95 ntBASIC10.51□□□□□ -0.73
SCXQ7RTU7 AC236430.1-201ENST00000402231 743 ntBASIC10.51□□□□□ -0.73
SCXQ7RTU7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 AC142381.1-201ENST00000426099 345 ntBASIC10.51□□□□□ -0.73
SCXQ7RTU7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 AL512638.1-201ENST00000457493 794 ntBASIC10.51□□□□□ -0.73
SCXQ7RTU7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 TERF1P3-201ENST00000505638 1227 ntBASIC10.51□□□□□ -0.73
SCXQ7RTU7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 MIR4453-201ENST00000584019 89 ntBASIC10.51□□□□□ -0.73
SCXQ7RTU7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 AC126177.1-201ENST00000547829 2218 ntBASIC10.51□□□□□ -0.73
SCXQ7RTU7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 AC067750.1-201ENST00000608826 6545 ntBASIC10.51□□□□□ -0.73
SCXQ7RTU7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 SNX18-202ENST00000343017 3140 ntBASIC10.51□□□□□ -0.73
SCXQ7RTU7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
SCXQ7RTU7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 AC099063.4-201ENST00000641099 1602 ntBASIC10.51□□□□□ -0.73
SCXQ7RTU7 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
SCXQ7RTU7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
SCXQ7RTU7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
SCXQ7RTU7 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SCXQ7RTU7 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SCXQ7RTU7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC10.5□□□□□ -0.73
SCXQ7RTU7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
SCXQ7RTU7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
SCXQ7RTU7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC10.5□□□□□ -0.73
SCXQ7RTU7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SCXQ7RTU7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC10.5□□□□□ -0.73
SCXQ7RTU7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SCXQ7RTU7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SCXQ7RTU7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SCXQ7RTU7 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
SCXQ7RTU7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC10.5□□□□□ -0.73
SCXQ7RTU7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
SCXQ7RTU7 AL365203.3-201ENST00000609742 2057 ntBASIC10.5□□□□□ -0.73
SCXQ7RTU7 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
SCXQ7RTU7 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms