Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
USP50Q70EL3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.18■□□□□ 0.5
USP50Q70EL3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
USP50Q70EL3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.18■□□□□ 0.5
USP50Q70EL3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
USP50Q70EL3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP50Q70EL3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP50Q70EL3 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP50Q70EL3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP50Q70EL3 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP50Q70EL3 HNRNPA1P41-201ENST00000397777 928 ntBASIC18.18■□□□□ 0.5
USP50Q70EL3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP50Q70EL3 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP50Q70EL3 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC18.18■□□□□ 0.5
USP50Q70EL3 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.18■□□□□ 0.5
USP50Q70EL3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.18■□□□□ 0.5
USP50Q70EL3 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.18■□□□□ 0.5
USP50Q70EL3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP50Q70EL3 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
USP50Q70EL3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.18■□□□□ 0.5
USP50Q70EL3 AL132994.2-201ENST00000603120 687 ntBASIC18.18■□□□□ 0.5
USP50Q70EL3 AC051619.9-201ENST00000623237 597 ntBASIC18.18■□□□□ 0.5
USP50Q70EL3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
USP50Q70EL3 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP50Q70EL3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP50Q70EL3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP50Q70EL3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
USP50Q70EL3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP50Q70EL3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
USP50Q70EL3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
USP50Q70EL3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
USP50Q70EL3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.17■□□□□ 0.5
USP50Q70EL3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.17■□□□□ 0.5
USP50Q70EL3 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.17■□□□□ 0.5
USP50Q70EL3 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC18.17■□□□□ 0.5
USP50Q70EL3 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.17■□□□□ 0.5
USP50Q70EL3 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC18.17■□□□□ 0.5
USP50Q70EL3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.17■□□□□ 0.5
USP50Q70EL3 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
USP50Q70EL3 MIR4783-201ENST00000580343 82 ntBASIC18.17■□□□□ 0.5
USP50Q70EL3 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.17■□□□□ 0.5
USP50Q70EL3 AC009955.4-201ENST00000597192 544 ntBASIC18.17■□□□□ 0.5
USP50Q70EL3 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC18.17■□□□□ 0.5
USP50Q70EL3 AC103810.10-201ENST00000606504 343 ntBASIC18.17■□□□□ 0.5
USP50Q70EL3 MIR6756-201ENST00000616240 63 ntBASIC18.17■□□□□ 0.5
USP50Q70EL3 AC009084.3-201ENST00000623356 437 ntBASIC18.17■□□□□ 0.5
USP50Q70EL3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.17■□□□□ 0.5
USP50Q70EL3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
USP50Q70EL3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
USP50Q70EL3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.17■□□□□ 0.5
USP50Q70EL3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.17■□□□□ 0.5
USP50Q70EL3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC18.17■□□□□ 0.5
USP50Q70EL3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
USP50Q70EL3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
USP50Q70EL3 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP50Q70EL3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.16■□□□□ 0.5
USP50Q70EL3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.16■□□□□ 0.5
USP50Q70EL3 TBC1D3J-201ENST00000620719 1426 ntBASIC18.16■□□□□ 0.5
USP50Q70EL3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
USP50Q70EL3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.16■□□□□ 0.5
USP50Q70EL3 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.16■□□□□ 0.5
USP50Q70EL3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC18.16■□□□□ 0.5
USP50Q70EL3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
USP50Q70EL3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP50Q70EL3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms