Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 AL109954.1-202ENST00000564051 2148 ntBASIC18.8■□□□□ 0.6
RNF20Q5VTR2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 AC023157.3-201ENST00000619086 2088 ntBASIC18.8■□□□□ 0.6
RNF20Q5VTR2 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RNF20Q5VTR2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 AC069120.2-201ENST00000524091 540 ntBASIC18.79■□□□□ 0.6
RNF20Q5VTR2 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 AC140878.1-201ENST00000565277 250 ntBASIC18.79■□□□□ 0.6
RNF20Q5VTR2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 AC073592.8-201ENST00000624126 511 ntBASIC18.79■□□□□ 0.6
RNF20Q5VTR2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RNF20Q5VTR2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 AC107890.1-201ENST00000422478 521 ntBASIC18.78■□□□□ 0.6
RNF20Q5VTR2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 FAM86GP-201ENST00000448322 971 ntBASIC18.78■□□□□ 0.6
RNF20Q5VTR2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.78■□□□□ 0.6
RNF20Q5VTR2 AC051619.7-201ENST00000568314 623 ntBASIC18.78■□□□□ 0.6
RNF20Q5VTR2 TEX28P1-201ENST00000613479 1221 ntBASIC18.78■□□□□ 0.6
RNF20Q5VTR2 AL138828.2-201ENST00000615812 383 ntBASIC18.78■□□□□ 0.6
RNF20Q5VTR2 TEX28P2-201ENST00000617764 1221 ntBASIC18.78■□□□□ 0.6
RNF20Q5VTR2 AC112693.3-201ENST00000624819 1983 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms