Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LCN1P1Q5VSP4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.3□□□□□ -0.12
LCN1P1Q5VSP4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.29□□□□□ -0.12
LCN1P1Q5VSP4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms