Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 ACTBP8-201ENST00000403258 1108 ntBASIC13.38□□□□□ -0.27
LRRK2Q5S007 PHKG1P2-201ENST00000457537 863 ntBASIC13.38□□□□□ -0.27
LRRK2Q5S007 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 NUDT4P2-201ENST00000578341 546 ntBASIC13.38□□□□□ -0.27
LRRK2Q5S007 MIR4522-201ENST00000584932 87 ntBASIC13.38□□□□□ -0.27
LRRK2Q5S007 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 LINC01144-201ENST00000626198 1710 ntBASIC13.37□□□□□ -0.27
LRRK2Q5S007 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 AC078875.1-201ENST00000431907 724 ntBASIC13.37□□□□□ -0.27
LRRK2Q5S007 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 AC084752.1-201ENST00000509766 622 ntBASIC13.37□□□□□ -0.27
LRRK2Q5S007 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.37□□□□□ -0.27
LRRK2Q5S007 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 HLA-J-204ENST00000495278 958 ntBASIC13.37□□□□□ -0.27
LRRK2Q5S007 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 AC021016.3-201ENST00000608367 477 ntBASIC13.37□□□□□ -0.27
LRRK2Q5S007 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 AC025262.2-201ENST00000623975 1056 ntBASIC13.37□□□□□ -0.27
LRRK2Q5S007 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRK2Q5S007 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LRRK2Q5S007 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRK2Q5S007 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRK2Q5S007 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms