Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 NME2P1-201ENST00000426182 414 ntBASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 AC087163.2-201ENST00000457299 853 ntBASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 RN7SL692P-201ENST00000464677 288 ntBASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 MEIS3P1-201ENST00000495167 958 ntBASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 AL662799.1-202ENST00000614205 422 ntBASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 AP003680.1-201ENST00000598970 3660 ntBASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CHRFAM7AQ494W8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 SPCS2P4-201ENST00000436160 681 ntBASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 AC097493.3-201ENST00000509725 367 ntBASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 AC004233.3-201ENST00000607794 1269 ntBASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 AC013268.4-201ENST00000637413 2228 ntBASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
CHRFAM7AQ494W8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 AC006058.4-201ENST00000624016 1670 ntBASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CHRFAM7AQ494W8 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms