Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 TOMM22P5-201ENST00000416399 439 ntBASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 RPL13AP25-201ENST00000484130 612 ntBASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 FAM86HP-204ENST00000513466 959 ntBASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 KRT90P-201ENST00000549264 1064 ntBASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 AC244669.2-201ENST00000612320 853 ntBASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTC1Q2NKJ3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTC1Q2NKJ3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTC1Q2NKJ3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTC1Q2NKJ3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTC1Q2NKJ3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTC1Q2NKJ3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CTC1Q2NKJ3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTC1Q2NKJ3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.77■□□□□ 0.27
CTC1Q2NKJ3 AC006538.1-201ENST00000567905 1585 ntBASIC16.77■□□□□ 0.27
CTC1Q2NKJ3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 SLC25A24P2-201ENST00000415059 510 ntBASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTC1Q2NKJ3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 AC134312.5-201ENST00000568031 1313 ntBASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 AZGP1P1-201ENST00000411909 902 ntBASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 AP001258.2-201ENST00000529891 490 ntBASIC16.75■□□□□ 0.27
CTC1Q2NKJ3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms