Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.28■□□□□ 0.36
UBXN1Q04323 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBXN1Q04323 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBXN1Q04323 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
UBXN1Q04323 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBXN1Q04323 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBXN1Q04323 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBXN1Q04323 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBXN1Q04323 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.28■□□□□ 0.36
UBXN1Q04323 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBXN1Q04323 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.28■□□□□ 0.36
UBXN1Q04323 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC17.27■□□□□ 0.36
UBXN1Q04323 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC17.27■□□□□ 0.36
UBXN1Q04323 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.27■□□□□ 0.36
UBXN1Q04323 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.27■□□□□ 0.36
UBXN1Q04323 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.27■□□□□ 0.36
UBXN1Q04323 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.27■□□□□ 0.36
UBXN1Q04323 KRT8P23-201ENST00000560090 1207 ntBASIC17.27■□□□□ 0.36
UBXN1Q04323 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.27■□□□□ 0.36
UBXN1Q04323 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.27■□□□□ 0.36
UBXN1Q04323 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
UBXN1Q04323 AC097359.3-201ENST00000603982 1210 ntBASIC17.27■□□□□ 0.36
UBXN1Q04323 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.27■□□□□ 0.36
UBXN1Q04323 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.27■□□□□ 0.36
UBXN1Q04323 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 FAM45BP-202ENST00000592932 1624 ntBASIC17.27■□□□□ 0.36
UBXN1Q04323 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBXN1Q04323 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
UBXN1Q04323 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBXN1Q04323 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.27■□□□□ 0.35
UBXN1Q04323 AP3S2-216ENST00000617003 1561 ntBASIC17.27■□□□□ 0.35
UBXN1Q04323 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBXN1Q04323 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
UBXN1Q04323 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBXN1Q04323 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
UBXN1Q04323 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
UBXN1Q04323 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UBXN1Q04323 UXT-AS1-201ENST00000590504 1525 ntBASIC17.26■□□□□ 0.35
UBXN1Q04323 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.26■□□□□ 0.35
UBXN1Q04323 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.26■□□□□ 0.35
UBXN1Q04323 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.26■□□□□ 0.35
UBXN1Q04323 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.26■□□□□ 0.35
UBXN1Q04323 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
UBXN1Q04323 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
UBXN1Q04323 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.26■□□□□ 0.35
UBXN1Q04323 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.26■□□□□ 0.35
UBXN1Q04323 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
UBXN1Q04323 TIMM8BP1-201ENST00000452384 211 ntBASIC17.26■□□□□ 0.35
UBXN1Q04323 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.26■□□□□ 0.35
UBXN1Q04323 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UBXN1Q04323 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.26■□□□□ 0.35
UBXN1Q04323 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
UBXN1Q04323 HNRNPUP1-201ENST00000554987 333 ntBASIC17.26■□□□□ 0.35
UBXN1Q04323 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.26■□□□□ 0.35
UBXN1Q04323 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.26■□□□□ 0.35
UBXN1Q04323 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.26■□□□□ 0.35
UBXN1Q04323 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.26■□□□□ 0.35
UBXN1Q04323 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.26■□□□□ 0.35
UBXN1Q04323 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.26■□□□□ 0.35
UBXN1Q04323 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 LINC01101-201ENST00000622953 1884 ntBASIC17.26■□□□□ 0.35
UBXN1Q04323 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 LINC00528-201ENST00000600723 2160 ntBASIC17.26■□□□□ 0.35
UBXN1Q04323 MIR600HG-201ENST00000449175 5984 ntBASIC17.26■□□□□ 0.35
UBXN1Q04323 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.26■□□□□ 0.35
UBXN1Q04323 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBXN1Q04323 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.26■□□□□ 0.35
UBXN1Q04323 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBXN1Q04323 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBXN1Q04323 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBXN1Q04323 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.25■□□□□ 0.35
UBXN1Q04323 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms