Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.16□□□□□ -0.14
VBP1P61758 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
VBP1P61758 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VBP1P61758 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
VBP1P61758 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VBP1P61758 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
VBP1P61758 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.16□□□□□ -0.14
VBP1P61758 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.16□□□□□ -0.14
VBP1P61758 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.16□□□□□ -0.14
VBP1P61758 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VBP1P61758 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.16□□□□□ -0.14
VBP1P61758 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VBP1P61758 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.16□□□□□ -0.14
VBP1P61758 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 AC117947.1-201ENST00000427448 529 ntBASIC14.16□□□□□ -0.14
VBP1P61758 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.16□□□□□ -0.14
VBP1P61758 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.16□□□□□ -0.14
VBP1P61758 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.16□□□□□ -0.14
VBP1P61758 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.16□□□□□ -0.14
VBP1P61758 AL139424.1-201ENST00000607572 797 ntBASIC14.16□□□□□ -0.14
VBP1P61758 AC083849.1-201ENST00000615227 514 ntBASIC14.16□□□□□ -0.14
VBP1P61758 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 AF228730.7-201ENST00000641842 219 ntBASIC14.16□□□□□ -0.14
VBP1P61758 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
VBP1P61758 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.16□□□□□ -0.14
VBP1P61758 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.16□□□□□ -0.14
VBP1P61758 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.16□□□□□ -0.14
VBP1P61758 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.16□□□□□ -0.14
VBP1P61758 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VBP1P61758 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VBP1P61758 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.15□□□□□ -0.14
VBP1P61758 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.15□□□□□ -0.14
VBP1P61758 PI4KAP1-204ENST00000612579 1703 ntBASIC14.15□□□□□ -0.14
VBP1P61758 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
VBP1P61758 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VBP1P61758 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.15□□□□□ -0.14
VBP1P61758 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.15□□□□□ -0.14
VBP1P61758 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.15□□□□□ -0.14
VBP1P61758 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VBP1P61758 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.15□□□□□ -0.14
VBP1P61758 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VBP1P61758 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.15□□□□□ -0.14
VBP1P61758 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
VBP1P61758 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 BX664615.1-201ENST00000443558 458 ntBASIC14.15□□□□□ -0.14
VBP1P61758 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.15□□□□□ -0.14
VBP1P61758 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.15□□□□□ -0.14
VBP1P61758 AC005412.3-201ENST00000580309 715 ntBASIC14.15□□□□□ -0.14
VBP1P61758 BNIP3P18-201ENST00000593976 575 ntBASIC14.15□□□□□ -0.14
VBP1P61758 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.15□□□□□ -0.14
VBP1P61758 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.15□□□□□ -0.14
VBP1P61758 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.15□□□□□ -0.14
VBP1P61758 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
VBP1P61758 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
VBP1P61758 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VBP1P61758 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
VBP1P61758 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VBP1P61758 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms