Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPS3AP61247 AL627223.1-201ENST00000416693 442 ntBASIC14.85□□□□□ -0.03
RPS3AP61247 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.85□□□□□ -0.03
RPS3AP61247 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.85□□□□□ -0.03
RPS3AP61247 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.85□□□□□ -0.03
RPS3AP61247 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.85□□□□□ -0.03
RPS3AP61247 AC027307.2-201ENST00000591252 911 ntBASIC14.85□□□□□ -0.03
RPS3AP61247 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.85□□□□□ -0.03
RPS3AP61247 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.85□□□□□ -0.03
RPS3AP61247 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPS3AP61247 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPS3AP61247 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
RPS3AP61247 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPS3AP61247 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RPS3AP61247 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPS3AP61247 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.85□□□□□ -0.03
RPS3AP61247 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.85□□□□□ -0.03
RPS3AP61247 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPS3AP61247 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RPS3AP61247 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.85□□□□□ -0.03
RPS3AP61247 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.85□□□□□ -0.03
RPS3AP61247 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RPS3AP61247 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RPS3AP61247 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPS3AP61247 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RPS3AP61247 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RPS3AP61247 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.84□□□□□ -0.03
RPS3AP61247 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
RPS3AP61247 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.84□□□□□ -0.03
RPS3AP61247 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
RPS3AP61247 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.84□□□□□ -0.03
RPS3AP61247 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.84□□□□□ -0.03
RPS3AP61247 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.84□□□□□ -0.03
RPS3AP61247 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.84□□□□□ -0.03
RPS3AP61247 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.84□□□□□ -0.03
RPS3AP61247 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RPS3AP61247 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
RPS3AP61247 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.84□□□□□ -0.03
RPS3AP61247 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.84□□□□□ -0.03
RPS3AP61247 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.84□□□□□ -0.03
RPS3AP61247 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.84□□□□□ -0.03
RPS3AP61247 TSEN15P1-201ENST00000423257 515 ntBASIC14.84□□□□□ -0.03
RPS3AP61247 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.84□□□□□ -0.03
RPS3AP61247 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.84□□□□□ -0.03
RPS3AP61247 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.84□□□□□ -0.03
RPS3AP61247 SPCS2P4-201ENST00000436160 681 ntBASIC14.84□□□□□ -0.03
RPS3AP61247 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.84□□□□□ -0.03
RPS3AP61247 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.84□□□□□ -0.03
RPS3AP61247 AC105233.2-201ENST00000523697 349 ntBASIC14.84□□□□□ -0.03
RPS3AP61247 AF228730.5-201ENST00000530288 346 ntBASIC14.84□□□□□ -0.03
RPS3AP61247 AC004449.1-201ENST00000564240 433 ntBASIC14.84□□□□□ -0.03
RPS3AP61247 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.84□□□□□ -0.03
RPS3AP61247 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.84□□□□□ -0.03
RPS3AP61247 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.84□□□□□ -0.03
RPS3AP61247 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.84□□□□□ -0.03
RPS3AP61247 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.84□□□□□ -0.03
RPS3AP61247 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 CICP20-201ENST00000443330 2801 ntBASIC14.84□□□□□ -0.03
RPS3AP61247 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.84□□□□□ -0.03
RPS3AP61247 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.84□□□□□ -0.03
RPS3AP61247 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.84□□□□□ -0.03
RPS3AP61247 KRT18P28-201ENST00000453838 1332 ntBASIC14.84□□□□□ -0.03
RPS3AP61247 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.84□□□□□ -0.03
RPS3AP61247 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.84□□□□□ -0.03
RPS3AP61247 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.84□□□□□ -0.03
RPS3AP61247 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
RPS3AP61247 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.84□□□□□ -0.03
RPS3AP61247 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RPS3AP61247 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.84□□□□□ -0.03
RPS3AP61247 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.83□□□□□ -0.03
RPS3AP61247 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPS3AP61247 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
RPS3AP61247 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPS3AP61247 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPS3AP61247 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
RPS3AP61247 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPS3AP61247 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPS3AP61247 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPS3AP61247 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.83□□□□□ -0.03
RPS3AP61247 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RPS3AP61247 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms