Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.49■□□□□ 0.87
RIPK4P57078 AP006294.1-201ENST00000415407 339 ntBASIC20.49■□□□□ 0.87
RIPK4P57078 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RIPK4P57078 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20.49■□□□□ 0.87
RIPK4P57078 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RIPK4P57078 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.49■□□□□ 0.87
RIPK4P57078 TBCB-211ENST00000589996 724 ntTSL 3 BASIC20.49■□□□□ 0.87
RIPK4P57078 AL049840.4-201ENST00000602422 811 ntBASIC20.49■□□□□ 0.87
RIPK4P57078 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC20.49■□□□□ 0.87
RIPK4P57078 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RIPK4P57078 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.49■□□□□ 0.87
RIPK4P57078 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RIPK4P57078 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RIPK4P57078 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RIPK4P57078 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RIPK4P57078 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RIPK4P57078 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
RIPK4P57078 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RIPK4P57078 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.49■□□□□ 0.87
RIPK4P57078 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RIPK4P57078 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RIPK4P57078 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
RIPK4P57078 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.48■□□□□ 0.87
RIPK4P57078 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RIPK4P57078 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RIPK4P57078 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
RIPK4P57078 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.48■□□□□ 0.87
RIPK4P57078 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
RIPK4P57078 AL442647.2-201ENST00000429864 857 ntBASIC20.48■□□□□ 0.87
RIPK4P57078 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RIPK4P57078 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.48■□□□□ 0.87
RIPK4P57078 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.48■□□□□ 0.87
RIPK4P57078 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.48■□□□□ 0.87
RIPK4P57078 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 VDAC1P7-201ENST00000462417 847 ntBASIC20.48■□□□□ 0.87
RIPK4P57078 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.48■□□□□ 0.87
RIPK4P57078 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.48■□□□□ 0.87
RIPK4P57078 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.48■□□□□ 0.87
RIPK4P57078 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.48■□□□□ 0.87
RIPK4P57078 AL359711.2-201ENST00000563105 872 ntBASIC20.48■□□□□ 0.87
RIPK4P57078 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RIPK4P57078 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC20.48■□□□□ 0.87
RIPK4P57078 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.48■□□□□ 0.87
RIPK4P57078 FUK-207ENST00000571514 3054 ntTSL 2 BASIC20.48■□□□□ 0.87
RIPK4P57078 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.48■□□□□ 0.87
RIPK4P57078 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC20.48■□□□□ 0.87
RIPK4P57078 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RIPK4P57078 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20.48■□□□□ 0.87
RIPK4P57078 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.48■□□□□ 0.87
RIPK4P57078 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.48■□□□□ 0.87
RIPK4P57078 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RIPK4P57078 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
RIPK4P57078 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RIPK4P57078 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.47■□□□□ 0.87
RIPK4P57078 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 RN7SL752P-201ENST00000463779 287 ntBASIC20.47■□□□□ 0.87
RIPK4P57078 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.47■□□□□ 0.87
RIPK4P57078 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RIPK4P57078 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RIPK4P57078 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.47■□□□□ 0.87
RIPK4P57078 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
RIPK4P57078 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RIPK4P57078 AC084364.1-201ENST00000551967 1556 ntBASIC20.46■□□□□ 0.87
RIPK4P57078 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.46■□□□□ 0.87
RIPK4P57078 CU639417.3-201ENST00000624240 1404 ntBASIC20.46■□□□□ 0.87
RIPK4P57078 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RIPK4P57078 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
RIPK4P57078 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RIPK4P57078 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms