Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.87□□□□□ -0.03
WNT3P56703 AC011467.4-201ENST00000594891 528 ntBASIC14.87□□□□□ -0.03
WNT3P56703 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.87□□□□□ -0.03
WNT3P56703 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.87□□□□□ -0.03
WNT3P56703 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.87□□□□□ -0.03
WNT3P56703 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
WNT3P56703 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
WNT3P56703 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
WNT3P56703 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.87□□□□□ -0.03
WNT3P56703 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.87□□□□□ -0.03
WNT3P56703 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.87□□□□□ -0.03
WNT3P56703 FAM45BP-202ENST00000592932 1624 ntBASIC14.87□□□□□ -0.03
WNT3P56703 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.87□□□□□ -0.03
WNT3P56703 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.87□□□□□ -0.03
WNT3P56703 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.87□□□□□ -0.03
WNT3P56703 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
WNT3P56703 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 AC106881.1-201ENST00000605849 3329 ntBASIC14.87□□□□□ -0.03
WNT3P56703 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
WNT3P56703 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
WNT3P56703 LINC01101-201ENST00000622953 1884 ntBASIC14.86□□□□□ -0.03
WNT3P56703 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
WNT3P56703 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
WNT3P56703 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
WNT3P56703 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.86□□□□□ -0.03
WNT3P56703 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
WNT3P56703 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
WNT3P56703 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.86□□□□□ -0.03
WNT3P56703 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.86□□□□□ -0.03
WNT3P56703 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.86□□□□□ -0.03
WNT3P56703 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.86□□□□□ -0.03
WNT3P56703 AC026150.2-201ENST00000564693 1156 ntBASIC14.86□□□□□ -0.03
WNT3P56703 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.86□□□□□ -0.03
WNT3P56703 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.86□□□□□ -0.03
WNT3P56703 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.86□□□□□ -0.03
WNT3P56703 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
WNT3P56703 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.86□□□□□ -0.03
WNT3P56703 RN7SL828P-201ENST00000607615 303 ntBASIC14.86□□□□□ -0.03
WNT3P56703 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
WNT3P56703 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.86□□□□□ -0.03
WNT3P56703 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
WNT3P56703 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
WNT3P56703 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
WNT3P56703 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.86□□□□□ -0.03
WNT3P56703 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.86□□□□□ -0.03
WNT3P56703 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.86□□□□□ -0.03
WNT3P56703 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.86□□□□□ -0.03
WNT3P56703 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
WNT3P56703 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3P56703 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3P56703 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3P56703 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.85□□□□□ -0.03
WNT3P56703 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.85□□□□□ -0.03
WNT3P56703 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
WNT3P56703 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms