Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF140P52738 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
ZNF140P52738 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
ZNF140P52738 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF140P52738 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.6■□□□□ 0.09
ZNF140P52738 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.6■□□□□ 0.09
ZNF140P52738 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ZNF140P52738 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.6■□□□□ 0.09
ZNF140P52738 MEIS3P1-201ENST00000495167 958 ntBASIC15.6■□□□□ 0.09
ZNF140P52738 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.6■□□□□ 0.09
ZNF140P52738 AC000095.1-201ENST00000603208 874 ntBASIC15.6■□□□□ 0.09
ZNF140P52738 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.6■□□□□ 0.09
ZNF140P52738 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.6■□□□□ 0.09
ZNF140P52738 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.6■□□□□ 0.09
ZNF140P52738 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.6■□□□□ 0.09
ZNF140P52738 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF140P52738 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
ZNF140P52738 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF140P52738 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF140P52738 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.6■□□□□ 0.09
ZNF140P52738 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
ZNF140P52738 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF140P52738 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
ZNF140P52738 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
ZNF140P52738 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF140P52738 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.6■□□□□ 0.09
ZNF140P52738 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
ZNF140P52738 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF140P52738 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.6■□□□□ 0.09
ZNF140P52738 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.6■□□□□ 0.09
ZNF140P52738 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF140P52738 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
ZNF140P52738 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
ZNF140P52738 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ZNF140P52738 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.59■□□□□ 0.09
ZNF140P52738 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
ZNF140P52738 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 AC011270.2-201ENST00000624293 2550 ntBASIC15.59■□□□□ 0.09
ZNF140P52738 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
ZNF140P52738 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.59■□□□□ 0.09
ZNF140P52738 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.59■□□□□ 0.09
ZNF140P52738 MIR770-201ENST00000390219 98 ntBASIC15.59■□□□□ 0.09
ZNF140P52738 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
ZNF140P52738 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.59■□□□□ 0.09
ZNF140P52738 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 UGT1A2P-201ENST00000454886 866 ntBASIC15.59■□□□□ 0.09
ZNF140P52738 RNA5SP421-201ENST00000516864 134 ntBASIC15.59■□□□□ 0.09
ZNF140P52738 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.59■□□□□ 0.09
ZNF140P52738 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.59■□□□□ 0.09
ZNF140P52738 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.59■□□□□ 0.09
ZNF140P52738 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.59■□□□□ 0.09
ZNF140P52738 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
ZNF140P52738 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
ZNF140P52738 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.59■□□□□ 0.09
ZNF140P52738 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.59■□□□□ 0.09
ZNF140P52738 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
ZNF140P52738 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.58■□□□□ 0.09
ZNF140P52738 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF140P52738 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
ZNF140P52738 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF140P52738 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF140P52738 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
ZNF140P52738 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
ZNF140P52738 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
ZNF140P52738 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.58■□□□□ 0.08
ZNF140P52738 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 AC148477.4-201ENST00000613430 1793 ntBASIC15.58■□□□□ 0.08
ZNF140P52738 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.58■□□□□ 0.08
ZNF140P52738 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
ZNF140P52738 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.58■□□□□ 0.08
ZNF140P52738 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.58■□□□□ 0.08
ZNF140P52738 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.58■□□□□ 0.08
ZNF140P52738 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF140P52738 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
ZNF140P52738 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF140P52738 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.58■□□□□ 0.08
ZNF140P52738 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms