Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 AC004890.2-204ENST00000481968 304 ntBASIC17.03■□□□□ 0.32
PDE6CP51160 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.03■□□□□ 0.32
PDE6CP51160 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.03■□□□□ 0.32
PDE6CP51160 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.03■□□□□ 0.32
PDE6CP51160 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PDE6CP51160 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.03■□□□□ 0.32
PDE6CP51160 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.03■□□□□ 0.32
PDE6CP51160 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PDE6CP51160 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDE6CP51160 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PDE6CP51160 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PDE6CP51160 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
PDE6CP51160 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.02■□□□□ 0.32
PDE6CP51160 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.02■□□□□ 0.32
PDE6CP51160 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PDE6CP51160 AC022532.1-201ENST00000624563 1728 ntBASIC17.02■□□□□ 0.32
PDE6CP51160 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.02■□□□□ 0.32
PDE6CP51160 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.02■□□□□ 0.32
PDE6CP51160 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 SSR4P1-203ENST00000599569 2260 ntBASIC17.02■□□□□ 0.32
PDE6CP51160 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.02■□□□□ 0.32
PDE6CP51160 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.02■□□□□ 0.32
PDE6CP51160 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.02■□□□□ 0.32
PDE6CP51160 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.02■□□□□ 0.32
PDE6CP51160 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.02■□□□□ 0.32
PDE6CP51160 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.02■□□□□ 0.32
PDE6CP51160 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.02■□□□□ 0.32
PDE6CP51160 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.02■□□□□ 0.32
PDE6CP51160 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.02■□□□□ 0.32
PDE6CP51160 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.02■□□□□ 0.32
PDE6CP51160 AC008761.3-201ENST00000624803 892 ntBASIC17.02■□□□□ 0.32
PDE6CP51160 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.02■□□□□ 0.32
PDE6CP51160 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDE6CP51160 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PDE6CP51160 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDE6CP51160 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
PDE6CP51160 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.02■□□□□ 0.31
PDE6CP51160 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDE6CP51160 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDE6CP51160 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDE6CP51160 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDE6CP51160 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.02■□□□□ 0.31
PDE6CP51160 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6CP51160 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PDE6CP51160 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PDE6CP51160 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PDE6CP51160 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.01■□□□□ 0.31
PDE6CP51160 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PDE6CP51160 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PDE6CP51160 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 AC136621.1-201ENST00000624017 2304 ntBASIC17.01■□□□□ 0.31
PDE6CP51160 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 AC236430.1-201ENST00000402231 743 ntBASIC17.01■□□□□ 0.31
PDE6CP51160 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.01■□□□□ 0.31
PDE6CP51160 RN7SL204P-201ENST00000582831 262 ntBASIC17.01■□□□□ 0.31
PDE6CP51160 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.01■□□□□ 0.31
PDE6CP51160 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PDE6CP51160 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PDE6CP51160 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.01■□□□□ 0.31
PDE6CP51160 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 AC022144.1-201ENST00000602255 1580 ntBASIC17.01■□□□□ 0.31
PDE6CP51160 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDE6CP51160 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms