Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 AC084121.3-201ENST00000641716 218 ntBASIC17.75■□□□□ 0.43
PRPHP41219 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.75■□□□□ 0.43
PRPHP41219 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRPHP41219 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRPHP41219 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRPHP41219 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.75■□□□□ 0.43
PRPHP41219 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.75■□□□□ 0.43
PRPHP41219 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.75■□□□□ 0.43
PRPHP41219 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.75■□□□□ 0.43
PRPHP41219 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRPHP41219 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRPHP41219 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.75■□□□□ 0.43
PRPHP41219 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PRPHP41219 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRPHP41219 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRPHP41219 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.74■□□□□ 0.43
PRPHP41219 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.74■□□□□ 0.43
PRPHP41219 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.74■□□□□ 0.43
PRPHP41219 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PRPHP41219 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
PRPHP41219 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PRPHP41219 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.74■□□□□ 0.43
PRPHP41219 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PRPHP41219 AL133267.1-201ENST00000398220 340 ntBASIC17.74■□□□□ 0.43
PRPHP41219 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.74■□□□□ 0.43
PRPHP41219 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.74■□□□□ 0.43
PRPHP41219 AC092337.1-201ENST00000568699 1129 ntBASIC17.74■□□□□ 0.43
PRPHP41219 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.74■□□□□ 0.43
PRPHP41219 AC015910.1-201ENST00000579400 975 ntBASIC17.74■□□□□ 0.43
PRPHP41219 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.74■□□□□ 0.43
PRPHP41219 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.74■□□□□ 0.43
PRPHP41219 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.74■□□□□ 0.43
PRPHP41219 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.74■□□□□ 0.43
PRPHP41219 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.74■□□□□ 0.43
PRPHP41219 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRPHP41219 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
PRPHP41219 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
PRPHP41219 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PRPHP41219 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.73■□□□□ 0.43
PRPHP41219 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PRPHP41219 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.73■□□□□ 0.43
PRPHP41219 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.73■□□□□ 0.43
PRPHP41219 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.73■□□□□ 0.43
PRPHP41219 AL109954.1-202ENST00000564051 2148 ntBASIC17.73■□□□□ 0.43
PRPHP41219 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 AC106028.4-201ENST00000614509 607 ntBASIC17.73■□□□□ 0.43
PRPHP41219 AL390754.1-201ENST00000619088 582 ntBASIC17.73■□□□□ 0.43
PRPHP41219 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 C18orf15-201ENST00000623680 2534 ntBASIC17.73■□□□□ 0.43
PRPHP41219 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 AC084364.1-201ENST00000551967 1556 ntBASIC17.73■□□□□ 0.43
PRPHP41219 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PRPHP41219 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.73■□□□□ 0.43
PRPHP41219 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
PRPHP41219 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRPHP41219 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRPHP41219 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms