Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.03□□□□□ -0.32
SNCAP37840 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SNCAP37840 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.03□□□□□ -0.32
SNCAP37840 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
SNCAP37840 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.03□□□□□ -0.32
SNCAP37840 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SNCAP37840 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SNCAP37840 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SNCAP37840 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.02□□□□□ -0.32
SNCAP37840 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.02□□□□□ -0.32
SNCAP37840 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SNCAP37840 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SNCAP37840 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SNCAP37840 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
SNCAP37840 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SNCAP37840 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.02□□□□□ -0.32
SNCAP37840 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.32
SNCAP37840 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SNCAP37840 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
SNCAP37840 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SNCAP37840 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.02□□□□□ -0.33
SNCAP37840 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
SNCAP37840 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SNCAP37840 AL513480.1-201ENST00000451731 511 ntBASIC13.02□□□□□ -0.33
SNCAP37840 AC108073.2-201ENST00000464002 357 ntBASIC13.02□□□□□ -0.33
SNCAP37840 CXCL1P1-201ENST00000502804 216 ntBASIC13.02□□□□□ -0.33
SNCAP37840 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 AL031432.2-201ENST00000566714 459 ntBASIC13.02□□□□□ -0.33
SNCAP37840 AL928711.1-201ENST00000570165 459 ntBASIC13.02□□□□□ -0.33
SNCAP37840 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 AL031055.1-201ENST00000606362 631 ntBASIC13.02□□□□□ -0.33
SNCAP37840 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.02□□□□□ -0.33
SNCAP37840 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.02□□□□□ -0.33
SNCAP37840 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SNCAP37840 AL359183.1-201ENST00000623796 2132 ntBASIC13.02□□□□□ -0.33
SNCAP37840 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.02□□□□□ -0.33
SNCAP37840 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.02□□□□□ -0.33
SNCAP37840 AC010327.5-201ENST00000586923 3061 ntBASIC13.02□□□□□ -0.33
SNCAP37840 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
SNCAP37840 AC117489.1-201ENST00000625169 3217 ntBASIC13.02□□□□□ -0.33
SNCAP37840 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SNCAP37840 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 MROH4P-201ENST00000431302 1578 ntBASIC13.02□□□□□ -0.33
SNCAP37840 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.02□□□□□ -0.33
SNCAP37840 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.02□□□□□ -0.33
SNCAP37840 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SNCAP37840 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SNCAP37840 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 AGAP7P-201ENST00000582299 2062 ntBASIC13.01□□□□□ -0.33
SNCAP37840 AGAP14-201ENST00000624701 2060 ntBASIC13.01□□□□□ -0.33
SNCAP37840 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SNCAP37840 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
SNCAP37840 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
SNCAP37840 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SNCAP37840 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SNCAP37840 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SNCAP37840 RNU1-129P-201ENST00000384064 167 ntBASIC13.01□□□□□ -0.33
SNCAP37840 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.01□□□□□ -0.33
SNCAP37840 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.01□□□□□ -0.33
SNCAP37840 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.01□□□□□ -0.33
SNCAP37840 MIR4751-201ENST00000578027 74 ntBASIC13.01□□□□□ -0.33
SNCAP37840 U1.21-201ENST00000580816 167 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms