Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.02■□□□□ 0.47
KRT2P35908 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT2P35908 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT2P35908 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KRT2P35908 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
KRT2P35908 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
KRT2P35908 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 C18orf15-201ENST00000623680 2534 ntBASIC18.01■□□□□ 0.47
KRT2P35908 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KRT2P35908 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT2P35908 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT2P35908 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT2P35908 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.01■□□□□ 0.47
KRT2P35908 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.01■□□□□ 0.47
KRT2P35908 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.01■□□□□ 0.47
KRT2P35908 CYMP-203ENST00000474680 1263 ntBASIC18.01■□□□□ 0.47
KRT2P35908 AC093214.1-201ENST00000511688 1107 ntBASIC18.01■□□□□ 0.47
KRT2P35908 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.01■□□□□ 0.47
KRT2P35908 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT2P35908 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.01■□□□□ 0.47
KRT2P35908 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT2P35908 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18■□□□□ 0.47
KRT2P35908 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18■□□□□ 0.47
KRT2P35908 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18■□□□□ 0.47
KRT2P35908 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18■□□□□ 0.47
KRT2P35908 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
KRT2P35908 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC18■□□□□ 0.47
KRT2P35908 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18■□□□□ 0.47
KRT2P35908 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18■□□□□ 0.47
KRT2P35908 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18■□□□□ 0.47
KRT2P35908 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18■□□□□ 0.47
KRT2P35908 BASP1P1-201ENST00000430708 665 ntBASIC18■□□□□ 0.47
KRT2P35908 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18■□□□□ 0.47
KRT2P35908 AC114501.2-201ENST00000439631 535 ntBASIC18■□□□□ 0.47
KRT2P35908 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
KRT2P35908 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18■□□□□ 0.47
KRT2P35908 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18■□□□□ 0.47
KRT2P35908 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18■□□□□ 0.47
KRT2P35908 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 DUT-210ENST00000559935 569 ntTSL 3 BASIC18■□□□□ 0.47
KRT2P35908 AC004461.2-201ENST00000629517 803 ntBASIC18■□□□□ 0.47
KRT2P35908 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18■□□□□ 0.47
KRT2P35908 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18■□□□□ 0.47
KRT2P35908 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
KRT2P35908 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT2P35908 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18■□□□□ 0.47
KRT2P35908 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
KRT2P35908 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18■□□□□ 0.47
KRT2P35908 AC022144.1-201ENST00000602255 1580 ntBASIC18■□□□□ 0.47
KRT2P35908 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
KRT2P35908 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRT2P35908 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KRT2P35908 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.99■□□□□ 0.47
KRT2P35908 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.99■□□□□ 0.47
KRT2P35908 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.99■□□□□ 0.47
KRT2P35908 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
KRT2P35908 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRT2P35908 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRT2P35908 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
KRT2P35908 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
KRT2P35908 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
KRT2P35908 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms