Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
KRT20P35900 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KRT20P35900 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KRT20P35900 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KRT20P35900 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.05■□□□□ -0
KRT20P35900 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
KRT20P35900 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.05■□□□□ -0
KRT20P35900 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
KRT20P35900 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
KRT20P35900 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.04■□□□□ -0
KRT20P35900 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.04■□□□□ -0
KRT20P35900 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.04■□□□□ -0
KRT20P35900 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.04■□□□□ -0
KRT20P35900 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.04■□□□□ -0
KRT20P35900 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.04■□□□□ -0
KRT20P35900 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.04■□□□□ -0
KRT20P35900 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 MIR346-201ENST00000362234 95 ntBASIC15.04■□□□□ -0
KRT20P35900 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 AC142381.1-201ENST00000426099 345 ntBASIC15.04■□□□□ -0
KRT20P35900 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.04■□□□□ -0
KRT20P35900 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.04■□□□□ -0
KRT20P35900 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
KRT20P35900 LINC01225-203ENST00000563550 1244 ntBASIC15.04■□□□□ -0
KRT20P35900 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
KRT20P35900 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.04■□□□□ -0
KRT20P35900 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.04■□□□□ -0
KRT20P35900 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
KRT20P35900 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
KRT20P35900 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.03■□□□□ -0
KRT20P35900 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
KRT20P35900 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.03■□□□□ -0
KRT20P35900 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
KRT20P35900 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.03■□□□□ -0
KRT20P35900 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.03■□□□□ -0
KRT20P35900 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.03■□□□□ -0
KRT20P35900 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.03■□□□□ -0
KRT20P35900 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
KRT20P35900 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 MIR648-201ENST00000385046 94 ntBASIC15.03■□□□□ -0
KRT20P35900 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.03■□□□□ -0
KRT20P35900 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.03■□□□□ -0
KRT20P35900 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.03■□□□□ -0
KRT20P35900 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
KRT20P35900 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
KRT20P35900 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.03■□□□□ -0
KRT20P35900 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.03■□□□□ -0
KRT20P35900 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.03■□□□□ -0
KRT20P35900 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.03■□□□□ -0
KRT20P35900 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.03■□□□□ -0
KRT20P35900 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
KRT20P35900 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.03■□□□□ -0
KRT20P35900 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.03■□□□□ -0
KRT20P35900 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.03■□□□□ -0
KRT20P35900 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
KRT20P35900 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.03■□□□□ -0
KRT20P35900 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms