Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.95■□□□□ 0.14
RPA3P35244 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.95■□□□□ 0.14
RPA3P35244 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.95■□□□□ 0.14
RPA3P35244 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.95■□□□□ 0.14
RPA3P35244 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.95■□□□□ 0.14
RPA3P35244 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.95■□□□□ 0.14
RPA3P35244 AC026120.1-201ENST00000611536 926 ntBASIC15.95■□□□□ 0.14
RPA3P35244 AC023511.2-201ENST00000618803 211 ntBASIC15.95■□□□□ 0.14
RPA3P35244 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.95■□□□□ 0.14
RPA3P35244 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RPA3P35244 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RPA3P35244 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.95■□□□□ 0.14
RPA3P35244 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RPA3P35244 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.94■□□□□ 0.14
RPA3P35244 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.94■□□□□ 0.14
RPA3P35244 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.94■□□□□ 0.14
RPA3P35244 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 AC127383.1-201ENST00000444697 1800 ntBASIC15.94■□□□□ 0.14
RPA3P35244 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.94■□□□□ 0.14
RPA3P35244 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
RPA3P35244 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 AC005912.2-201ENST00000619492 2400 ntBASIC15.94■□□□□ 0.14
RPA3P35244 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.94■□□□□ 0.14
RPA3P35244 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RPA3P35244 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RPA3P35244 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.94■□□□□ 0.14
RPA3P35244 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.94■□□□□ 0.14
RPA3P35244 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.94■□□□□ 0.14
RPA3P35244 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 YBX1P5-201ENST00000509441 847 ntBASIC15.94■□□□□ 0.14
RPA3P35244 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.94■□□□□ 0.14
RPA3P35244 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.94■□□□□ 0.14
RPA3P35244 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
RPA3P35244 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.94■□□□□ 0.14
RPA3P35244 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.94■□□□□ 0.14
RPA3P35244 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
RPA3P35244 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.94■□□□□ 0.14
RPA3P35244 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
RPA3P35244 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
RPA3P35244 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
RPA3P35244 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.94■□□□□ 0.14
RPA3P35244 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RPA3P35244 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
RPA3P35244 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.94■□□□□ 0.14
RPA3P35244 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RPA3P35244 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.93■□□□□ 0.14
RPA3P35244 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RPA3P35244 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
RPA3P35244 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.93■□□□□ 0.14
RPA3P35244 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RPA3P35244 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.93■□□□□ 0.14
RPA3P35244 MIR1233-2-201ENST00000408138 82 ntBASIC15.93■□□□□ 0.14
RPA3P35244 MIR1233-1-201ENST00000408722 82 ntBASIC15.93■□□□□ 0.14
RPA3P35244 AC211486.1-202ENST00000416371 468 ntBASIC15.93■□□□□ 0.14
RPA3P35244 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
RPA3P35244 ADH5P3-201ENST00000433842 1137 ntBASIC15.93■□□□□ 0.14
RPA3P35244 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.93■□□□□ 0.14
RPA3P35244 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.93■□□□□ 0.14
RPA3P35244 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.93■□□□□ 0.14
RPA3P35244 AC211476.1-201ENST00000503899 468 ntBASIC15.93■□□□□ 0.14
RPA3P35244 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms