Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.35■□□□□ 0.37
CTGFP29279 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CTGFP29279 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CTGFP29279 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 AC006335.1-201ENST00000445200 547 ntBASIC17.35■□□□□ 0.37
CTGFP29279 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
CTGFP29279 AC022616.1-201ENST00000518688 554 ntBASIC17.35■□□□□ 0.37
CTGFP29279 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 AC009955.4-201ENST00000597192 544 ntBASIC17.35■□□□□ 0.37
CTGFP29279 AL358472.3-201ENST00000608147 415 ntBASIC17.35■□□□□ 0.37
CTGFP29279 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.35■□□□□ 0.37
CTGFP29279 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.35■□□□□ 0.37
CTGFP29279 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTGFP29279 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CTGFP29279 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CTGFP29279 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.34■□□□□ 0.37
CTGFP29279 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTGFP29279 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.34■□□□□ 0.37
CTGFP29279 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.34■□□□□ 0.37
CTGFP29279 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CTGFP29279 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.34■□□□□ 0.37
CTGFP29279 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.34■□□□□ 0.37
CTGFP29279 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.34■□□□□ 0.37
CTGFP29279 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.34■□□□□ 0.37
CTGFP29279 PUDPP3-201ENST00000445368 636 ntBASIC17.34■□□□□ 0.37
CTGFP29279 AC073150.1-201ENST00000450406 1084 ntBASIC17.34■□□□□ 0.37
CTGFP29279 NOC2LP1-201ENST00000450578 752 ntBASIC17.34■□□□□ 0.37
CTGFP29279 TUBB8P8-201ENST00000458717 1058 ntBASIC17.34■□□□□ 0.37
CTGFP29279 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.34■□□□□ 0.37
CTGFP29279 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.34■□□□□ 0.37
CTGFP29279 SNORD3B-2-202ENST00000571722 791 ntBASIC17.34■□□□□ 0.37
CTGFP29279 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.34■□□□□ 0.37
CTGFP29279 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.34■□□□□ 0.37
CTGFP29279 AC092171.5-201ENST00000608012 942 ntBASIC17.34■□□□□ 0.37
CTGFP29279 YRDCP1-201ENST00000621419 643 ntBASIC17.34■□□□□ 0.37
CTGFP29279 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.34■□□□□ 0.37
CTGFP29279 AL805961.1-201ENST00000642026 753 ntBASIC17.34■□□□□ 0.37
CTGFP29279 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTGFP29279 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTGFP29279 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CTGFP29279 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTGFP29279 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTGFP29279 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTGFP29279 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CTGFP29279 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTGFP29279 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CTGFP29279 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CTGFP29279 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTGFP29279 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTGFP29279 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTGFP29279 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CTGFP29279 MESTP3-201ENST00000503460 968 ntBASIC17.33■□□□□ 0.36
CTGFP29279 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
CTGFP29279 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms