Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.92■□□□□ 0.62
CHMLP26374 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.92■□□□□ 0.62
CHMLP26374 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.92■□□□□ 0.62
CHMLP26374 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CHMLP26374 CICP11-201ENST00000434745 2827 ntBASIC18.92■□□□□ 0.62
CHMLP26374 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 AGAP7P-201ENST00000582299 2062 ntBASIC18.92■□□□□ 0.62
CHMLP26374 AGAP14-201ENST00000624701 2060 ntBASIC18.92■□□□□ 0.62
CHMLP26374 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMLP26374 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMLP26374 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.92■□□□□ 0.62
CHMLP26374 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CHMLP26374 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CHMLP26374 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHMLP26374 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHMLP26374 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHMLP26374 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHMLP26374 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMLP26374 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHMLP26374 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.91■□□□□ 0.62
CHMLP26374 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CHMLP26374 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.91■□□□□ 0.62
CHMLP26374 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 MIR943-201ENST00000401286 94 ntBASIC18.91■□□□□ 0.62
CHMLP26374 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.91■□□□□ 0.62
CHMLP26374 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.91■□□□□ 0.62
CHMLP26374 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.91■□□□□ 0.62
CHMLP26374 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHMLP26374 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.91■□□□□ 0.62
CHMLP26374 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.91■□□□□ 0.62
CHMLP26374 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
CHMLP26374 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMLP26374 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.91■□□□□ 0.62
CHMLP26374 TPO-203ENST00000346956 2923 ntTSL 5 BASIC18.91■□□□□ 0.62
CHMLP26374 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMLP26374 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHMLP26374 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.91■□□□□ 0.62
CHMLP26374 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CHMLP26374 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CHMLP26374 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHMLP26374 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHMLP26374 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMLP26374 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CHMLP26374 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMLP26374 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 AP002414.2-201ENST00000591780 3365 ntBASIC18.9■□□□□ 0.62
CHMLP26374 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CHMLP26374 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.9■□□□□ 0.62
CHMLP26374 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.9■□□□□ 0.62
CHMLP26374 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
CHMLP26374 AC006538.3-201ENST00000612495 578 ntBASIC18.9■□□□□ 0.62
CHMLP26374 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHMLP26374 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CHMLP26374 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMLP26374 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHMLP26374 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.9■□□□□ 0.62
CHMLP26374 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.9■□□□□ 0.62
CHMLP26374 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHMLP26374 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CHMLP26374 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHMLP26374 TSPY26P-202ENST00000565928 3884 ntBASIC18.89■□□□□ 0.62
CHMLP26374 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CHMLP26374 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CHMLP26374 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMLP26374 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CHMLP26374 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms