Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN1P18031 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN1P18031 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN1P18031 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN1P18031 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN1P18031 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PTPN1P18031 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PTPN1P18031 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN1P18031 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN1P18031 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN1P18031 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN1P18031 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN1P18031 AP006294.1-201ENST00000415407 339 ntBASIC16.61■□□□□ 0.25
PTPN1P18031 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PTPN1P18031 NME2P1-201ENST00000426182 414 ntBASIC16.61■□□□□ 0.25
PTPN1P18031 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.61■□□□□ 0.25
PTPN1P18031 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN1P18031 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN1P18031 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN1P18031 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN1P18031 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN1P18031 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PTPN1P18031 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN1P18031 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.61■□□□□ 0.25
PTPN1P18031 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PTPN1P18031 AC022188.1-201ENST00000620960 1664 ntBASIC16.61■□□□□ 0.25
PTPN1P18031 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN1P18031 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTPN1P18031 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN1P18031 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.61■□□□□ 0.25
PTPN1P18031 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PTPN1P18031 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.61■□□□□ 0.25
PTPN1P18031 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN1P18031 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTPN1P18031 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTPN1P18031 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN1P18031 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN1P18031 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN1P18031 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN1P18031 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN1P18031 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN1P18031 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.6■□□□□ 0.25
PTPN1P18031 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 BRI3BPP1-201ENST00000594224 787 ntBASIC16.6■□□□□ 0.25
PTPN1P18031 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.6■□□□□ 0.25
PTPN1P18031 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
PTPN1P18031 AC007950.2-201ENST00000615045 2347 ntBASIC16.6■□□□□ 0.25
PTPN1P18031 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN1P18031 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
PTPN1P18031 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN1P18031 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.6■□□□□ 0.25
PTPN1P18031 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.6■□□□□ 0.25
PTPN1P18031 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTPN1P18031 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.6■□□□□ 0.25
PTPN1P18031 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN1P18031 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN1P18031 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
PTPN1P18031 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN1P18031 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN1P18031 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN1P18031 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PTPN1P18031 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN1P18031 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN1P18031 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PTPN1P18031 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN1P18031 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN1P18031 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PTPN1P18031 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.59■□□□□ 0.25
PTPN1P18031 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PTPN1P18031 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PTPN1P18031 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms