Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP9P0CG40 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.21■□□□□ 0.03
SP9P0CG40 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SP9P0CG40 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC15.21■□□□□ 0.03
SP9P0CG40 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.21■□□□□ 0.03
SP9P0CG40 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.21■□□□□ 0.03
SP9P0CG40 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SP9P0CG40 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.21■□□□□ 0.03
SP9P0CG40 AC100827.2-201ENST00000563214 1194 ntBASIC15.21■□□□□ 0.03
SP9P0CG40 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC15.21■□□□□ 0.03
SP9P0CG40 AC141586.1-203ENST00000567242 366 ntBASIC15.21■□□□□ 0.03
SP9P0CG40 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.21■□□□□ 0.03
SP9P0CG40 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.21■□□□□ 0.03
SP9P0CG40 MIR6842-201ENST00000612539 65 ntBASIC15.21■□□□□ 0.03
SP9P0CG40 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.21■□□□□ 0.03
SP9P0CG40 YRDCP1-201ENST00000621419 643 ntBASIC15.21■□□□□ 0.03
SP9P0CG40 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.21■□□□□ 0.03
SP9P0CG40 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP9P0CG40 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.21■□□□□ 0.03
SP9P0CG40 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.21■□□□□ 0.03
SP9P0CG40 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.21■□□□□ 0.03
SP9P0CG40 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP9P0CG40 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP9P0CG40 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
SP9P0CG40 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SP9P0CG40 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
SP9P0CG40 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.21■□□□□ 0.02
SP9P0CG40 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SP9P0CG40 AL158070.2-201ENST00000623713 1621 ntBASIC15.21■□□□□ 0.02
SP9P0CG40 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SP9P0CG40 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SP9P0CG40 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC15.2■□□□□ 0.02
SP9P0CG40 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
SP9P0CG40 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.2■□□□□ 0.02
SP9P0CG40 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.2■□□□□ 0.02
SP9P0CG40 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SP9P0CG40 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SP9P0CG40 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 RPS9P1-201ENST00000419943 583 ntBASIC15.2■□□□□ 0.02
SP9P0CG40 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.2■□□□□ 0.02
SP9P0CG40 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.2■□□□□ 0.02
SP9P0CG40 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.2■□□□□ 0.02
SP9P0CG40 AC022616.1-201ENST00000518688 554 ntBASIC15.2■□□□□ 0.02
SP9P0CG40 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.2■□□□□ 0.02
SP9P0CG40 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.2■□□□□ 0.02
SP9P0CG40 DNM1P30-201ENST00000563586 452 ntBASIC15.2■□□□□ 0.02
SP9P0CG40 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.2■□□□□ 0.02
SP9P0CG40 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
SP9P0CG40 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.2■□□□□ 0.02
SP9P0CG40 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
SP9P0CG40 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SP9P0CG40 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.2■□□□□ 0.02
SP9P0CG40 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SP9P0CG40 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SP9P0CG40 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SP9P0CG40 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.2■□□□□ 0.02
SP9P0CG40 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.2■□□□□ 0.02
SP9P0CG40 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SP9P0CG40 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SP9P0CG40 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SP9P0CG40 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SP9P0CG40 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SP9P0CG40 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.19■□□□□ 0.02
SP9P0CG40 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SP9P0CG40 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SP9P0CG40 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SP9P0CG40 AC078925.2-201ENST00000624013 1973 ntBASIC15.19■□□□□ 0.02
SP9P0CG40 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SP9P0CG40 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.19■□□□□ 0.02
SP9P0CG40 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.19■□□□□ 0.02
SP9P0CG40 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.19■□□□□ 0.02
SP9P0CG40 AP002803.1-201ENST00000528836 498 ntBASIC15.19■□□□□ 0.02
SP9P0CG40 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SP9P0CG40 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC15.19■□□□□ 0.02
SP9P0CG40 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.19■□□□□ 0.02
SP9P0CG40 SNORD3B-2-202ENST00000571722 791 ntBASIC15.19■□□□□ 0.02
SP9P0CG40 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.19■□□□□ 0.02
SP9P0CG40 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SP9P0CG40 AC138466.3-201ENST00000619983 221 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms