Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC1P07992 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ERCC1P07992 FAM58DP-201ENST00000428076 619 ntBASIC14.03□□□□□ -0.16
ERCC1P07992 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.03□□□□□ -0.16
ERCC1P07992 AL512638.1-201ENST00000457493 794 ntBASIC14.03□□□□□ -0.16
ERCC1P07992 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC1P07992 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC1P07992 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.03□□□□□ -0.16
ERCC1P07992 AC140878.1-201ENST00000565277 250 ntBASIC14.03□□□□□ -0.16
ERCC1P07992 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.03□□□□□ -0.16
ERCC1P07992 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC1P07992 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.03□□□□□ -0.16
ERCC1P07992 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.03□□□□□ -0.16
ERCC1P07992 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC1P07992 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ERCC1P07992 AC020658.6-201ENST00000623564 1870 ntBASIC14.03□□□□□ -0.16
ERCC1P07992 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.03□□□□□ -0.16
ERCC1P07992 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.03□□□□□ -0.16
ERCC1P07992 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC1P07992 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC1P07992 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC1P07992 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.03□□□□□ -0.16
ERCC1P07992 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.03□□□□□ -0.16
ERCC1P07992 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC1P07992 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ERCC1P07992 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC1P07992 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ERCC1P07992 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ERCC1P07992 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
ERCC1P07992 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.02□□□□□ -0.16
ERCC1P07992 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.02□□□□□ -0.16
ERCC1P07992 TNRC18P2-201ENST00000417666 2714 ntBASIC14.02□□□□□ -0.16
ERCC1P07992 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ERCC1P07992 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.02□□□□□ -0.16
ERCC1P07992 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ERCC1P07992 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.02□□□□□ -0.16
ERCC1P07992 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
ERCC1P07992 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ERCC1P07992 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ERCC1P07992 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ERCC1P07992 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ERCC1P07992 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ERCC1P07992 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ERCC1P07992 MIR346-201ENST00000362234 95 ntBASIC14.02□□□□□ -0.17
ERCC1P07992 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.02□□□□□ -0.17
ERCC1P07992 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
ERCC1P07992 MIR943-201ENST00000401286 94 ntBASIC14.02□□□□□ -0.17
ERCC1P07992 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.02□□□□□ -0.17
ERCC1P07992 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.02□□□□□ -0.17
ERCC1P07992 AL353705.2-201ENST00000428243 662 ntBASIC14.02□□□□□ -0.17
ERCC1P07992 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.02□□□□□ -0.17
ERCC1P07992 AC093724.1-201ENST00000448659 1027 ntBASIC14.02□□□□□ -0.17
ERCC1P07992 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.02□□□□□ -0.17
ERCC1P07992 AC093214.1-201ENST00000511688 1107 ntBASIC14.02□□□□□ -0.17
ERCC1P07992 AC069120.2-201ENST00000524091 540 ntBASIC14.02□□□□□ -0.17
ERCC1P07992 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.02□□□□□ -0.17
ERCC1P07992 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ERCC1P07992 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ERCC1P07992 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ERCC1P07992 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ERCC1P07992 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ERCC1P07992 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ERCC1P07992 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ERCC1P07992 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ERCC1P07992 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ERCC1P07992 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.02□□□□□ -0.17
ERCC1P07992 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ERCC1P07992 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.02□□□□□ -0.17
ERCC1P07992 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
ERCC1P07992 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
ERCC1P07992 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ERCC1P07992 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ERCC1P07992 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ERCC1P07992 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ERCC1P07992 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ERCC1P07992 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ERCC1P07992 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ERCC1P07992 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ERCC1P07992 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ERCC1P07992 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.01□□□□□ -0.17
ERCC1P07992 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.01□□□□□ -0.17
ERCC1P07992 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ERCC1P07992 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ERCC1P07992 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.01□□□□□ -0.17
ERCC1P07992 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ERCC1P07992 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.01□□□□□ -0.17
ERCC1P07992 FAM8A3P-201ENST00000427218 844 ntBASIC14.01□□□□□ -0.17
ERCC1P07992 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms