Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.76□□□□□ -0.21
SFTPBP07988 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SFTPBP07988 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SFTPBP07988 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 AL355306.1-201ENST00000415580 579 ntBASIC13.76□□□□□ -0.21
SFTPBP07988 AC245100.5-201ENST00000452108 331 ntBASIC13.76□□□□□ -0.21
SFTPBP07988 TIMM8BP1-201ENST00000452384 211 ntBASIC13.76□□□□□ -0.21
SFTPBP07988 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.76□□□□□ -0.21
SFTPBP07988 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.76□□□□□ -0.21
SFTPBP07988 PRYP6-201ENST00000514804 343 ntBASIC13.76□□□□□ -0.21
SFTPBP07988 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.76□□□□□ -0.21
SFTPBP07988 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.76□□□□□ -0.21
SFTPBP07988 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.76□□□□□ -0.21
SFTPBP07988 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 AL161645.1-201ENST00000622716 1255 ntBASIC13.76□□□□□ -0.21
SFTPBP07988 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
SFTPBP07988 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.76□□□□□ -0.21
SFTPBP07988 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SFTPBP07988 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SFTPBP07988 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.76□□□□□ -0.21
SFTPBP07988 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SFTPBP07988 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.75□□□□□ -0.21
SFTPBP07988 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.75□□□□□ -0.21
SFTPBP07988 PPT1-215ENST00000641471 2368 ntBASIC13.75□□□□□ -0.21
SFTPBP07988 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.75□□□□□ -0.21
SFTPBP07988 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.75□□□□□ -0.21
SFTPBP07988 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.75□□□□□ -0.21
SFTPBP07988 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.75□□□□□ -0.21
SFTPBP07988 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.75□□□□□ -0.21
SFTPBP07988 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SFTPBP07988 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.75□□□□□ -0.21
SFTPBP07988 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.75□□□□□ -0.21
SFTPBP07988 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.75□□□□□ -0.21
SFTPBP07988 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SFTPBP07988 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
SFTPBP07988 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.75□□□□□ -0.21
SFTPBP07988 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.75□□□□□ -0.21
SFTPBP07988 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SFTPBP07988 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SFTPBP07988 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.74□□□□□ -0.21
SFTPBP07988 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
SFTPBP07988 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms