Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HLA-DQB2P05538 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 AC144831.1-201ENST00000573312 2656 ntBASIC15.92■□□□□ 0.14
HLA-DQB2P05538 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 TOMM22P5-201ENST00000416399 439 ntBASIC15.92■□□□□ 0.14
HLA-DQB2P05538 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 AC104794.3-201ENST00000566840 1248 ntBASIC15.92■□□□□ 0.14
HLA-DQB2P05538 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 AC015910.1-201ENST00000579400 975 ntBASIC15.92■□□□□ 0.14
HLA-DQB2P05538 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 LINC00554-201ENST00000564841 3011 ntBASIC15.92■□□□□ 0.14
HLA-DQB2P05538 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HLA-DQB2P05538 AC138035.3-201ENST00000622706 2791 ntBASIC15.92■□□□□ 0.14
HLA-DQB2P05538 AC084364.1-201ENST00000551967 1556 ntBASIC15.92■□□□□ 0.14
HLA-DQB2P05538 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 AL121723.1-201ENST00000445194 1519 ntBASIC15.91■□□□□ 0.14
HLA-DQB2P05538 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLA-DQB2P05538 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms