Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 RNU1-129P-201ENST00000384064 167 ntBASIC14.22□□□□□ -0.13
HLA-DPB1P04440 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 U1.21-201ENST00000580816 167 ntBASIC14.22□□□□□ -0.13
HLA-DPB1P04440 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 AL031055.1-201ENST00000606362 631 ntBASIC14.22□□□□□ -0.13
HLA-DPB1P04440 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
HLA-DPB1P04440 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 AC007686.3-201ENST00000619017 3487 ntBASIC14.21□□□□□ -0.13
HLA-DPB1P04440 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 AC074386.1-202ENST00000463561 864 ntBASIC14.21□□□□□ -0.13
HLA-DPB1P04440 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 PDPK2P-202ENST00000562415 1191 ntBASIC14.21□□□□□ -0.13
HLA-DPB1P04440 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HLA-DPB1P04440 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.21□□□□□ -0.14
HLA-DPB1P04440 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DPB1P04440 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DPB1P04440 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
HLA-DPB1P04440 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
HLA-DPB1P04440 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DPB1P04440 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DPB1P04440 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DPB1P04440 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DPB1P04440 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
HLA-DPB1P04440 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
HLA-DPB1P04440 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.2□□□□□ -0.14
HLA-DPB1P04440 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HLA-DPB1P04440 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms